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System of HydrodYnamic Finite Element Modules
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SHYFEM-model/shyfem
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#------------------------------------------------------------------------ # # Copyright (C) 1985-2020 Georg Umgiesser # # This file is part of SHYFEM. # # SHYFEM is free software: you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation, either version 3 of the License, or # (at your option) any later version. # # SHYFEM is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with SHYFEM. Please see the file COPYING in the main directory. # If not, see <http://www.gnu.org/licenses/>. # #------------------------------------------------------------------------ This is the README file for the SHYFEM model #------------------------------------------------------------------------ Contact: Georg Umgiesser Oceanography, ISMAR-CNR Arsenale Tesa 104, Castello 2737/F 30122 Venezia Italy Tel. : +39-041-2407943 Fax : +39-041-2407940 E-Mail : [email protected] #------------------------------------------------------------------------ Availability: https://github.com/SHYFEM-model/ Comments and issues should be posted in the Issues section on the abovementioned GitHub repository #------------------------------------------------------------------------ Documentation: The manual can be found in femdoc/final/shyfem.pdf Example applications can be found in examples #------------------------------------------------------------------------ The software is also supported by various institutions: CNR - ISMAR (Istituto di Scienze Marine) --------- Georg Umgiesser, system engineering Christian Ferrarin, renewal times, sediment transport Marco Bajo, system solvers, assimilation Debora Bellafiore, non-hydrostatic modeling, fluid mud Michol Ghezzo, ecological modeling, lagrangian model, connectivity Francesca De Pascalis, lagrangian model William McKiver, non-hydrostatic modeling CNR - IAS (Istituto di Ambiente Marino Costiero) --------- Andrea Cucco, lagrangian model, renewal times INOGS (Istituto Nazionale di Oceanografia e di Geofisica Sperimentale) --------- Cosimo Solidoro, ecological modeling, BFM Donata Melaku Canu, ecological modeling, EUTRO Eric Pascolo, OMP parallelization MRI (Marine Research Institute, Klaipeda University, Lithuania) --------- Petras Zemlys, ecological modeling, AquaBC Istanbul University --------- Ali Erturk, ecological modeling, AquaBC Fondazione CMCC (Centro Mediterraneno per i cambiamenti climatici) --------- Silvia Mocavero, MPI parallization Giorgio Micaletto, MPI parallization #------------------------------------------------------------------------ Directory structure =================== examples example applications fem3d FEM model and utility routines femadj Routines for the adjustment of the grid after the automatic mesh generation. The program to run is shyadj. femanim Routines to generate animations from postscript files fembin Binaries used by the model femcheck Routines to set up and check the installation femdoc Documentation, manual, etc. femdummy Dummy directory femersem Routines for BFM (ERSEM) ecological model femgotm Routines for GOTM turbulence clousre model femlib Library routines (populated during compilation) femplot Plotting routines for post processing. The routine to run is shyplot. femregres Routines to do regression testing. Developers only. femutil Various utility programs grid Visualization routine for GRD files hcbs Outdated files for plotting to monitor mesh Automatic mesh generator post Library for plotting to Postscript files. tmp Temporary directory Compiling the model =================== You can compile everything from the SHYFEM directory by running the command "make fem". Other commands are: make help gives help on available make targets make fem compiles everything make doc makes documentation in femdoc (manual) make all compiles (shyfem) and makes documents (doc) make clean deletes objetc and executable files in all subdirectories make cleanall as clean, but cleans also libraries #------------------------------------------------------------------------
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