Add/xml upgrades/v11 #83
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* add functions to compute Julian day from year of simulation start * fix bug after remark from S. Buis * rename functions --------- Co-authored-by: Patrice Lecharpentier <[email protected]>
* removed man for internal func, adapted comput_day_from_date for a vector of dates, tests added * update man: for dates vector
* removed man for internal func, adapted comput_day_from_date for a vector of dates, tests added * update man: for dates vector * added rhub workflow for rhub * news update, site, description * Update CITATION.cff --------- Co-authored-by: plecharpent <[email protected]>
… xml_document class adaptation for xsd files use
…s in ugrade function of XML files to V11.0
…ar and the date can be a character format one
…Packs/SticsRFiles into review/compute_day_number
… tests, set minimum R version to 4.0.0
…Packs/SticsRFiles into review/compute_day_number
Merge branch 'main' into add/xml-upgrades/v11 # Conflicts: # inst/extdata/xml.zip
Review/compute day number
* added TODO comments for fixing parameters values attached to layers. * * added in get/set param_txt functions plant_id and value_id args for filtering extraction of parameters values or replacement for subsets including plant id and or values ids. * Checks have been added for controlling extraction/replacement operations on vectors * For parameters vectors, the behaviour is to replace all values with the same if only one replacement value. Otherwise, for replacing a subset of values a vector of ids must be given with the new values vector (but not in case of full replacement) * fixes: error management when ini file content dose not match the used version, retrieving ini values for version >= 10, management of unknown parameters
* fix: exact default value to FALSE * fix: documentation
add get_cultivars_list with tests
* add compute_date_from_day with tests * Update compute_date_from_day.R some reformatting, fix examples * Update _pkgdown.yml added compute_date_from_day --------- Co-authored-by: Patrice Lecharpentier <[email protected]>
add get_cultivars_param
some reformating
…placing specific values. (#101)
* Update DESCRIPTION * Update CITATION.cff --------- Co-authored-by: plecharpent <[email protected]>
* update stics web site url * missing Rmd update
* new function added for copying mod, obs, lai and weather files * man update * missing description update
* new function added for copying mod, obs, lai and weather files * Revert "new function added for copying mod, obs, lai and weather files" This reverts commit e131a36.
…iles (#108) * fix: generating plt and tec files for the associated crop for the one species case (i.e. wheat / wheat) * New function for generating param_gen.xml and param_newform.xml for the use case of generating xml inputs files (no parameter forcing allowed for the moment, just copy a version specific file from examples) * doc update (site, vignette) * fix: namespace and desc, mistake on previous commit for get_usms_files * fix: duplicate chunk name * fix: fun doc * fix examples * missing overwrite in examples
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