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@ZuberLab

Zuber lab

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  1. crispr-mageck-nf crispr-mageck-nf Public

    Analyze CRISPR and shRNA functional genetic screening data

    Nextflow 7 5

  2. crispr-process-nf crispr-process-nf Public

    Process CRISPR and shRNA functional genetic screening data

    Nextflow 3 1

Repositories

Showing 10 of 11 repositories
  • dual-crispr-process-nf Public

    Process dual-sgRNA CRISPR functional genetic screening data.

    ZuberLab/dual-crispr-process-nf’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Aug 1, 2024
  • crispr-process-nf Public

    Process CRISPR and shRNA functional genetic screening data

    ZuberLab/crispr-process-nf’s past year of commit activity
    Nextflow 3 MIT 1 0 0 Updated Jul 9, 2024
  • crispr-mageck-nf Public

    Analyze CRISPR and shRNA functional genetic screening data

    ZuberLab/crispr-mageck-nf’s past year of commit activity
    Nextflow 7 MIT 5 0 0 Updated Jun 3, 2024
  • Containers Public

    Repository of Makefiles for Docker containers

    ZuberLab/Containers’s past year of commit activity
    Dockerfile 0 AGPL-3.0 1 0 0 Updated Apr 13, 2020
  • crisprepo-shiny Public

    Shiny frontend for browsing screening data

    ZuberLab/crisprepo-shiny’s past year of commit activity
    R 1 AGPL-3.0 0 0 0 Updated Jul 6, 2018
  • vbcf-nf Public

    Retrieve Files from VBCF Sequencing Facility

    ZuberLab/vbcf-nf’s past year of commit activity
    Nextflow 1 MIT 0 0 0 Updated Apr 26, 2018
  • crispr-nf Public

    Pre-processing of multiplexed CRISPR / shRNA Screens (deprecated)

    ZuberLab/crispr-nf’s past year of commit activity
    Nextflow 2 MIT 2 1 0 Updated Apr 23, 2018
  • mageck-nf Public

    Statistical Analysis of multiplexed CRISPR / shRNA Screens using MAGeCK (deprecated)

    ZuberLab/mageck-nf’s past year of commit activity
    R 3 MIT 0 0 0 Updated Apr 23, 2018
  • guidemapper-nf Public

    Annotate CRISPR and shRNA screening libraries

    ZuberLab/guidemapper-nf’s past year of commit activity
    R 1 MIT 0 0 0 Updated Apr 11, 2018
  • sra-nf Public

    Download Raw Reads from SRA Archive

    ZuberLab/sra-nf’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Feb 8, 2018
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