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861 Open 1,163 Closed
861 Open 1,163 Closed
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Issues list

Gff3, no gene name in ouput - MissingGeneID
#2209 opened Sep 7, 2024 by desmodus1984
Error during mapping to mitochondrial genome
#2208 opened Sep 5, 2024 by desmodus1984
Only one sample is Mapped
#2207 opened Sep 4, 2024 by Gabriela-PH
3
STARsolo UMI calling problem (UMI position shift) after cell barcode correction by barcode whitelist
#2205 opened Aug 30, 2024 by s-shichino1989
STARsolo for chimeric reads
#2203 opened Aug 23, 2024 by Sogand65
FATAL ERROR in input read file: the total length of barcode sequence is 151 not equal to expected 28, and also not mapped reads
#2202 opened Aug 22, 2024 by lopezCascales
1
STARSolo, alignment of Scell from different lanes
#2201 opened Aug 22, 2024 by oneito
[2.7.10b] Read length in FATAL ERROR message does not match actual read length
#2200 opened Aug 22, 2024 by sbresnahan
2
Fatal INPUT FILE error, no exon lines in the GTF file
#2199 opened Aug 21, 2024 by Alecrim24
Alignement of viral genome with reads from infected host
#2198 opened Aug 20, 2024 by LioLenr
Some reads do not seem to be assigned to genes correctly by starsolo
#2197 opened Aug 20, 2024 by zhouyiqi91
STAR hangs at 300% CPU
#2196 opened Aug 19, 2024 by Redmar-van-den-Berg
--quantMode GeneCounts output lacks two T-cell receptor genes compared to htseq-count
#2195 opened Aug 16, 2024 by mkazanov
soloUMIfiltering distribution tracking?
#2194 opened Aug 8, 2024 by jamesnemesh
Chimeric reads very high
#2193 opened Aug 8, 2024 by manjumoorthy95
Parameters for 10x 5' alignment
#2192 opened Aug 7, 2024 by rishvanth-kp
1
secondary alignment bit in flag not set for unmapped mate of a pair with the other mate mapped
#2190 opened Aug 2, 2024 by ankebusch
Problem with reading FASTQ files
#2189 opened Aug 2, 2024 by spelajelesijevic
[Version 2.7.11b] - Error running 'make' command
#2187 opened Jul 30, 2024 by snipershady
6
Possible to implement special treatment of multi-gene reads for BCR/TCR genes?
#2186 opened Jul 28, 2024 by ulyssebaruchel
fatal error, cannot create output file for unmapped.out.mate1.thread0
#2185 opened Jul 26, 2024 by kmadhusudhanan
STAR alignments generate different counts: Full genome vs Split genome
#2184 opened Jul 26, 2024 by ReemaSingh
Segmentation fault (core dumped)
#2183 opened Jul 24, 2024 by yueli8
STARsolo output-Summary.csv
#2182 opened Jul 23, 2024 by Bio-Lan
Running STARsolo for pico kit reads
#2181 opened Jul 17, 2024 by yeroslaviz
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