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@beaplab

BEAP Lab

Biology and Ecology of Abundant Protists Lab, Institut de Biologia Evolutiva

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  1. EukProt EukProt Public

    Helper Perl scripts and tree files associated with the EukProt database of genome-scale eukaryotic protein sequence data sets.

    Perl 11 2

  2. Ancestral-Reconstruction Ancestral-Reconstruction Public

    Scripts and templates to accompany "Dollo parsimony overestimates ancestral gene content reconstructions"

    Perl 1

  3. transcriptome_metaT_quantification transcriptome_metaT_quantification Public

    Small pipeline to quantify transcriptomes from a metaT

    Nextflow

  4. Protist_barcode_MAG_correspondence Protist_barcode_MAG_correspondence Public

    Online Supplement to "On the relationship between protist metabarcoding and protist metagenome-assembled genomes"

    R

  5. delving-florenciella delving-florenciella Public

    Analyzing the transcriptomes of the Florenciella genus

    R

Repositories

Showing 5 of 5 repositories
  • transcriptome_metaT_quantification Public

    Small pipeline to quantify transcriptomes from a metaT

    beaplab/transcriptome_metaT_quantification’s past year of commit activity
    Nextflow 0 0 4 0 Updated Apr 9, 2024
  • delving-florenciella Public

    Analyzing the transcriptomes of the Florenciella genus

    beaplab/delving-florenciella’s past year of commit activity
    R 0 0 0 0 Updated Mar 8, 2024
  • EukProt Public

    Helper Perl scripts and tree files associated with the EukProt database of genome-scale eukaryotic protein sequence data sets.

    beaplab/EukProt’s past year of commit activity
    Perl 11 GPL-3.0 2 0 0 Updated Nov 30, 2023
  • Ancestral-Reconstruction Public

    Scripts and templates to accompany "Dollo parsimony overestimates ancestral gene content reconstructions"

    beaplab/Ancestral-Reconstruction’s past year of commit activity
    Perl 1 0 0 0 Updated Oct 17, 2023
  • Protist_barcode_MAG_correspondence Public

    Online Supplement to "On the relationship between protist metabarcoding and protist metagenome-assembled genomes"

    beaplab/Protist_barcode_MAG_correspondence’s past year of commit activity
    R 0 CC0-1.0 0 0 0 Updated Oct 13, 2023

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