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@bedapub

BEDApub

Roche Pharma Research and Early Development, Pharmaceutical Sciences, Roche Innovation Center Basel, F. Hoffmann-La Roche Ltd, Grenzacherstrasse 124, 4070 Basel

Popular repositories Loading

  1. besca besca Public

    BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis

    Python 48 16

  2. splicekit splicekit Public

    splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq

    Python 15 4

  3. designit designit Public

    Blocking and randomization for experimental design

    HTML 7 1

  4. space-microbe space-microbe Public

    Python 4

  5. bescape bescape Public

    BESCApe is a cell deconvolution package.

    HTML 3 1

  6. GeMS GeMS Public

    Gene set management system based on a MongoDB backend

    Python 3 1

Repositories

Showing 10 of 47 repositories
  • bksnake Public

    Public version of bksnake - biokit snakemake - bulk RNASeq Snakemake workflow

    bedapub/bksnake’s past year of commit activity
    Python 2 0 0 0 Updated Aug 12, 2024
  • ComplexSim Public
    bedapub/ComplexSim’s past year of commit activity
    R 0 0 0 0 Updated Jul 16, 2024
  • splicekit Public

    splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq

    bedapub/splicekit’s past year of commit activity
    Python 15 4 1 0 Updated Jul 12, 2024
  • designit Public

    Blocking and randomization for experimental design

    bedapub/designit’s past year of commit activity
    HTML 7 1 13 (2 issues need help) 4 Updated Jul 10, 2024
  • HBVouroboros Public

    HBVouroboros automates sequencing-based HBV genotyping and expression profiling

    bedapub/HBVouroboros’s past year of commit activity
    Python 2 GPL-3.0 1 5 6 Updated Jul 9, 2024
  • ribiosAnnotation Public

    Annotate features (genes, mRNAs, proteins, ...) with ribios

    bedapub/ribiosAnnotation’s past year of commit activity
    R 0 1 2 0 Updated Jul 7, 2024
  • besca Public

    BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis

    bedapub/besca’s past year of commit activity
    Python 48 GPL-3.0 16 26 (1 issue needs help) 6 Updated Jun 25, 2024
  • ribiosScripts Public

    Rscripts as command-line tools from the corresponding repository on BEDA github.

    bedapub/ribiosScripts’s past year of commit activity
    R 1 GPL-3.0 0 0 0 Updated Jun 17, 2024
  • PMDA-Summer-School Public Forked from LuisaMohr/PMDA-Summer-School

    Public website of Roche PMDA Summer School

    bedapub/PMDA-Summer-School’s past year of commit activity
    2 GPL-3.0 3 0 0 Updated May 17, 2024
  • ribiosUtils Public

    The ribiosUtils package, a swiss-army knife for bioinformatics and computational biology tasks in drug discovery

    bedapub/ribiosUtils’s past year of commit activity
    C 0 1 1 0 Updated May 16, 2024
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