Skip to content

Issues: bihealth/sodar-server

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

338 Open 1,592 Closed
338 Open 1,592 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Process/protocol editing failure with missing unit app: samplesheets Issue in the samplesheets app bug Something isn't working
#1989 opened Sep 6, 2024 by mikkonie v0.15.1
@mikkonie
1
Include LDAP settings in admin_settings.rst documentation Improvements or additions to documentation
#1988 opened Sep 6, 2024 by mikkonie v1.0.0
Upgrade dependencies for v0.15.1 environment Issues of dependencies, CI, deployment etc.
#1986 opened Sep 2, 2024 by mikkonie
1 of 2 tasks
v0.15.1
@mikkonie
Cleanup and prepare v0.15.1 documentation Improvements or additions to documentation internal Changes invisible to the user or APIs (e.g. refactoring and optimization)
#1985 opened Sep 2, 2024 by mikkonie
11 tasks
v0.15.1
@mikkonie
Add unit tests for assay app plugins app: samplesheets Issue in the samplesheets app internal Changes invisible to the user or APIs (e.g. refactoring and optimization)
#1980 opened Aug 8, 2024 by mikkonie v1.0.0
@mikkonie
Update BAM/CRAM/VCF omit pattern defaults? app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement help wanted Extra attention is needed tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#1979 opened Aug 8, 2024 by mikkonie
Fix flake8 E721 complaints after Python upgrade app: samplesheets Issue in the samplesheets app internal Changes invisible to the user or APIs (e.g. refactoring and optimization)
#1978 opened Aug 7, 2024 by mikkonie v1.0.0
@mikkonie
Specify and document new method for dev installs documentation Improvements or additions to documentation environment Issues of dependencies, CI, deployment etc.
#1977 opened Aug 7, 2024 by mikkonie v1.0.0
Add django-axes support environment Issues of dependencies, CI, deployment etc. feature Requested feature or enhancement
#1976 opened Aug 5, 2024 by mikkonie v1.1.0
@mikkonie
Make ontology term selector load spinner more visible app: samplesheets Issue in the samplesheets app cosmetic Cosmetic change, does not affect functionality
#1974 opened Aug 2, 2024 by mikkonie v1.0.0
Stop logging project locked messages in timeline? app: landingzones Issue in the landingzones app app: taskflowbackend Issue in the taskflowbackend app feature Requested feature or enhancement tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#1970 opened Jul 31, 2024 by mikkonie
Optimize landing zone creation with restrict collections enabled app: landingzones Issue in the landingzones app feature Requested feature or enhancement
#1969 opened Jul 25, 2024 by mikkonie
Squash migrations for v1.0 app: landingzones Issue in the landingzones app app: ontologyaccess Issue in the ontologyaccess app app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement
#1967 opened Jul 18, 2024 by mikkonie
3 tasks
v1.0.0
@mikkonie
Incorrect/invalid links in IGV setup documentation bug Something isn't working documentation Improvements or additions to documentation help wanted Extra attention is needed
#1964 opened Jul 17, 2024 by mikkonie
Upgrade dependencies for v1.0.0 environment Issues of dependencies, CI, deployment etc.
#1959 opened Jun 28, 2024 by mikkonie
2 tasks
v1.0.0
@mikkonie
Add update_row() results in study table cache app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement
#1956 opened Jun 27, 2024 by mikkonie v1.0.0
@mikkonie
Python-irodsclient v2.x raises permission errors in BatchMoveDataObjectsTask app: taskflowbackend Issue in the taskflowbackend app bug Something isn't working ongoing Ongoing issue, needs observation or pending on other projects
#1955 opened Jun 25, 2024 by mikkonie
@mikkonie
4
Update project for OpenAPI compatibility environment Issues of dependencies, CI, deployment etc.
#1951 opened Jun 21, 2024 by mikkonie v1.0.0
@mikkonie
Increase CharField length for samplesheets models app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#1942 opened Jun 3, 2024 by mikkonie
@mikkonie
2
Add opt-out settings for email notifications app: landingzones Issue in the landingzones app app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement
#1939 opened Apr 23, 2024 by mikkonie v1.0.0
@mikkonie
Add support for multiple VCF files in germline IGV sessions app: samplesheets Issue in the samplesheets app feature Requested feature or enhancement future Ideas for the future, not in current milestones tbd Comments wanted, spec/schedule/prioritization to be decided, etc.
#1937 opened Apr 4, 2024 by mikkonie
Update REST API versioning for SODAR Core v1.0 app: irodsinfo Issue in the irodsinfo app app: landingzones Issue in the landingzones app app: samplesheets Issue in the samplesheets app breaking Breaking change, to be implemented and documented with care feature Requested feature or enhancement
#1936 opened Mar 26, 2024 by mikkonie
7 tasks
v1.0.0
@mikkonie
Grant contributors and guests read access to all landing zones within project app: landingzones Issue in the landingzones app app: taskflowbackend Issue in the taskflowbackend app feature Requested feature or enhancement
#1935 opened Mar 26, 2024 by mikkonie v1.0.0
Grant owners and delegates iRODS read/write access to contributor zones app: landingzones Issue in the landingzones app app: taskflowbackend Issue in the taskflowbackend app feature Requested feature or enhancement
#1934 opened Mar 26, 2024 by mikkonie v1.0.0
IGV session merging opens a new session app: samplesheets Issue in the samplesheets app bug Something isn't working environment Issues of dependencies, CI, deployment etc. help wanted Extra attention is needed
#1932 opened Mar 19, 2024 by mikkonie v1.0.0
3
ProTip! Updated in the last three days: updated:>2024-09-03.