Add GAM.binary.gam.gam and GAM.binary.mgcv.bam in OptionsBigboss

biomodhub · Jan 26, 2024 · c3a0c67 · c3a0c67
1 parent 1e2dfa8
commit c3a0c67
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Showing 4 changed files with 26 additions and 1 deletion.
diff --git a/R/biomod2_data.R b/R/biomod2_data.R
@@ -72,6 +72,16 @@
 #'        \item \code{method = 'mars'}
 #'      }
 #'    }
+#'    \item{\code{GAM.binary.gam.gam}}{
+# \itemize{
+#   \item ...
+# }
+#'    }
+#'    \item{\code{GAM.binary.mgcv.bam}}{
+     # \itemize{
+     #   \item ...
+     # }
+#'    }
 #'    \item{\code{GAM.binary.mgcv.gam}}{
 #'      \itemize{
 #'        \item \code{family = binomial(link = 'logit')}
@@ -145,6 +155,11 @@
 "OptionsBigboss"
 
 # bm.opt <- bm_ModelingOptions(data.type = "binary", strategy = "default")
+# bm.opt_gam2 <- bm_ModelingOptions(data.type = "binary", strategy = "default", models = "GAM.gam.gam")
+# bm.opt_gam3 <- bm_ModelingOptions(data.type = "binary", strategy = "default", models = "GAM.mgcv.bam")
+# bm.opt@models <- sort(unique(c(bm.opt@models, bm.opt_gam2@models, bm.opt_gam3@models)))
+# bm.opt@options <- c(bm.opt@options, bm.opt_gam2@options, bm.opt_gam3@options)
+# bm.opt@options <- bm.opt@options[bm.opt@models]
 # bm.opt@[email protected][['_allData_allRun']]$size = 5 #NULL
 # bm.opt@[email protected][['_allData_allRun']]$decay = 5
 # bm.opt@[email protected][['_allData_allRun']]$trace = FALSE

diff --git a/data/OptionsBigboss.rda b/data/OptionsBigboss.rda
diff --git a/docs/reference/OptionsBigboss.html b/docs/reference/OptionsBigboss.html
diff --git a/man/OptionsBigboss.Rd b/man/OptionsBigboss.Rd