Mention acceptable compressed VCF file extension in GenomicsDBImport …

…error message (#7692) Resolves #7691
broadinstitute · Feb 23, 2022 · 77b725d · 77b725d
1 parent 687d93e
commit 77b725d
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/src/main/java/org/broadinstitute/hellbender/tools/genomicsdb/GenomicsDBImport.java b/src/main/java/org/broadinstitute/hellbender/tools/genomicsdb/GenomicsDBImport.java
@@ -514,7 +514,8 @@ private static void assertIntervalsCoverEntireContigs(GenomicsDBImporter importe
     private static void assertVariantFileIsCompressedAndIndexed(final Path path) {
         if (!path.toString().toLowerCase().endsWith(FileExtensions.COMPRESSED_VCF)) {
             throw new UserException("Input variant files must be block compressed vcfs when using " +
-                BYPASS_FEATURE_READER + ", but " + path.toString() + " does not appear to be");
+                BYPASS_FEATURE_READER + ", but " + path.toString() + " does not end with " +
+                    "the standard file extension " + FileExtensions.COMPRESSED_VCF);
         }
         Path indexPath = path.resolveSibling(path.getFileName() + FileExtensions.COMPRESSED_VCF_INDEX);
         IOUtils.assertFileIsReadable(indexPath);