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replace calls to getChr() with getContig() after htsjdk update #259

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lbergelson opened this issue Mar 6, 2015 · 2 comments
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replace calls to getChr() with getContig() after htsjdk update #259

lbergelson opened this issue Mar 6, 2015 · 2 comments
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@lbergelson
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Feature.getChr() is being replaced with getContig()
@lbergelson lbergelson mentioned this issue Mar 6, 2015
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@akiezun akiezun added this to the Coelacanth milestone Apr 15, 2015
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akiezun commented Apr 15, 2015

related to compile warninng #377

@akiezun akiezun modified the milestone: Coelacanth Apr 20, 2015
@lbergelson lbergelson mentioned this issue May 1, 2015
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@nenewell nenewell mentioned this issue May 1, 2015
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lbergelson added a commit that referenced this issue May 2, 2015
@lbergelson
Merge pull request #478 from nenewell/master
20e430d 
#259 - replace calls to getChr() with getContig().

Closes #478
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akiezun commented May 6, 2015

done by #478

@akiezun akiezun closed this as completed May 6, 2015
schaluva added a commit that referenced this issue Mar 30, 2021
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#259 Inline schema for importgenomes.wdl (#7171)
98a024d 
* inline schemas

* inline schema testing

* remove new lines in strings for schema def

* formatting of if else values

* replace dockstore yml to original

* reorganize where default values are to workflow input block
mmorgantaylor pushed a commit that referenced this issue Apr 6, 2021
@schaluva @mmorgantaylor
#259 Inline schema for importgenomes.wdl (#7171)
27af70f 
* inline schemas

* inline schema testing

* remove new lines in strings for schema def

* formatting of if else values

* replace dockstore yml to original

* reorganize where default values are to workflow input block
This was referenced Mar 17, 2023
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