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Rudimentary support for other output types, support for scattering extract cohort #6949

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merged 5 commits into from
Nov 10, 2020

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@kcibul kcibul commented Nov 10, 2020

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@kcibul kcibul merged commit 511f50f into ah_var_store Nov 10, 2020
@kcibul kcibul deleted the kc_orcwriter branch November 10, 2020 20:58
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Travis reported job failures from build 32083
Failures in the following jobs:

Test Type JDK Job ID Logs
conda openjdk8 32083.5 logs

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Travis reported job failures from build 32085
Failures in the following jobs:

Test Type JDK Job ID Logs
conda openjdk8 32085.5 logs

kcibul added a commit that referenced this pull request Jan 29, 2021
…tract cohort (#6949)

* cohort extract work for WGS

* rudimentary support for configurable output types

* support for nocalls

* extract wdl, missing classes, and compiler warning

* tidying
kcibul added a commit that referenced this pull request Feb 1, 2021
…tract cohort (#6949)

* cohort extract work for WGS

* rudimentary support for configurable output types

* support for nocalls

* extract wdl, missing classes, and compiler warning

* tidying
Marianie-Simeon pushed a commit that referenced this pull request Feb 16, 2021
…tract cohort (#6949)

* cohort extract work for WGS

* rudimentary support for configurable output types

* support for nocalls

* extract wdl, missing classes, and compiler warning

* tidying
kcibul added a commit that referenced this pull request Mar 9, 2021
…tract cohort (#6949)

* cohort extract work for WGS

* rudimentary support for configurable output types

* support for nocalls

* extract wdl, missing classes, and compiler warning

* tidying
mmorgantaylor pushed a commit that referenced this pull request Apr 6, 2021
…tract cohort (#6949)

* cohort extract work for WGS

* rudimentary support for configurable output types

* support for nocalls

* extract wdl, missing classes, and compiler warning

* tidying
mmorgantaylor pushed a commit that referenced this pull request Apr 6, 2021
…tract cohort (#6949)

* cohort extract work for WGS

* rudimentary support for configurable output types

* support for nocalls

* extract wdl, missing classes, and compiler warning

* tidying
This was referenced Mar 17, 2023
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3 participants