fixing bug in filtering on export from variantstore #6976
Merged
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Fixing a bug I noticed while spot checking sites. We should eventually add some tests that check expected outputs, but I'll save that for another day. We were accidentally applying filters to alleles in the filtering table that didn't exist in the cohort that was pulled out. Now we're only looking at VQSLODs in the filter table for alleles that are present in the output VCF.