Add haploid support to GnarlyGenotyper #7750
Merged
Codecov / codecov/project
succeeded
Jul 14, 2023 in 0s
86.345% (+0.009%) compared to e0090de
View this Pull Request on Codecov
86.345% (+0.009%) compared to e0090de
Details
Codecov Report
Merging #7750 (487b91c) into master (e0090de) will increase coverage by
0.009%.
The diff coverage is84.211%.
Additional details and impacted files
@@ Coverage Diff @@
## master #7750 +/- ##
===============================================
+ Coverage 86.336% 86.345% +0.009%
- Complexity 39493 39508 +15
===============================================
Files 2360 2360
Lines 185777 185915 +138
Branches 20315 20315
===============================================
+ Hits 160392 160528 +136
- Misses 18239 18240 +1
- Partials 7146 7147 +1 | Impacted Files | Coverage Δ | |
|---|---|---|
| ...tools/walkers/gnarlyGenotyper/GnarlyGenotyper.java | 83.168% <ø> (ø) |
|
| ...lkers/variantutils/ReblockGVCFIntegrationTest.java | 97.714% <ø> (ø) |
|
| ...walkers/gnarlyGenotyper/GnarlyGenotyperEngine.java | 77.731% <62.500%> (+0.350%) |
⬆️ |
| .../tools/walkers/GnarlyGenotyperIntegrationTest.java | 99.123% <100.000%> (+0.133%) |
⬆️ |
| ...gnarlyGenotyper/GnarlyGenotyperEngineUnitTest.java | 89.744% <100.000%> (ø) |
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