WDL and python scripts to use the VDS in the VAT #8077
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Codecov Report
Additional details and impacted files@@ Coverage Diff @@
## ah_var_store #8077 +/- ##
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Coverage ? 86.203%
Complexity ? 35186
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Files ? 2173
Lines ? 165045
Branches ? 17794
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Hits ? 142274
Misses ? 16439
Partials ? 6332 |
RoriCremer
changed the title
RoriCremer
changed the title
Co-authored-by: Miguel Covarrubias <[email protected]>
…_sites_only_vcf.py Co-authored-by: Miguel Covarrubias <[email protected]>
Fixed bug in strip_custom_annotations_from_sites_only_vcf.py Added a test for strip_custom_annotations_from_sites_only_vcf.py
* Split PrepAnnotationJson into two methods in order to parallelize * Filter out sites with AC=0
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Github actions tests reported job failures from actions build 3624346186
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Github actions tests reported job failures from actions build 3624374149
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Github actions tests reported job failures from actions build 3624337595
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Github actions tests reported job failures from actions build 3624458247
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* Create interval lists and scatter across chunks of the sites-only VCF.
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Github actions tests reported job failures from actions build 3650386129
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gbggrant
approved these changes
Dec 8, 2022
gbggrant
changed the title
This was referenced Mar 17, 2023
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