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Remove hardcoded limit on max homopolymer call #8088

Merged
merged 9 commits into from
Dec 7, 2022
Merged

Remove hardcoded limit on max homopolymer call #8088

merged 9 commits into from
Dec 7, 2022

Commits on Dec 1, 2022

  1. Fixing hard coded max hmer in flow matrix mods

    @ilyasoifer
    ilyasoifer committed Dec 1, 2022
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  2. Another hard coded place

    @ilyasoifer
    ilyasoifer committed Dec 1, 2022
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  3. Added comment regarding MAX_CLASS

    @ilyasoifer
    ilyasoifer committed Dec 1, 2022
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  4. Test added

    @ilyasoifer
    ilyasoifer committed Dec 1, 2022
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  5. flow assembly-collapse-hmer-size -> 20

    @ilyasoifer
    ilyasoifer committed Dec 1, 2022
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  6. Added missing file

    @ilyasoifer
    ilyasoifer committed Dec 1, 2022
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  7. Make code determine the collapsing automatically

    @ilyasoifer
    ilyasoifer committed Dec 1, 2022
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Commits on Dec 2, 2022

  1. Bug fix

    @ilyasoifer
    ilyasoifer committed Dec 2, 2022
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Commits on Dec 3, 2022

  1. Fixed a bug in assembly complexity annotation that caused difference … 

    …in results between JAVA8 and JAVA11
    @ilyasoifer
    ilyasoifer committed Dec 3, 2022
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