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VS-820 Incorporate code to stay under Google quotas for new accounts into beta workflow #8200

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merged 12 commits into from
Feb 14, 2023

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koncheto-broad
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piped beta variables through to high-level beta workflow.
Also updated the gatk jar so it succeeds, as it didn't before.

Successful run of beta workflow on quickstart data

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@gbggrant gbggrant left a comment

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The grammar police is hear!

scripts/variantstore/wdl/GvsJointVariantCalling.wdl Outdated Show resolved Hide resolved
scripts/variantstore/wdl/GvsJointVariantCalling.wdl Outdated Show resolved Hide resolved
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codecov bot commented Feb 13, 2023

Codecov Report

❗ No coverage uploaded for pull request base (ah_var_store@d07e773). Click here to learn what that means.
The diff coverage is n/a.

Additional details and impacted files
@@               Coverage Diff                @@
##             ah_var_store     #8200   +/-   ##
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  Coverage                ?   79.183%           
  Complexity              ?     33607           
================================================
  Files                   ?      2191           
  Lines                   ?    166339           
  Branches                ?     17900           
================================================
  Hits                    ?    131713           
  Misses                  ?     28399           
  Partials                ?      6227           

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@rsasch rsasch left a comment

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LGTM 👍🏻

@koncheto-broad koncheto-broad merged commit d1a6df3 into ah_var_store Feb 14, 2023
@koncheto-broad koncheto-broad deleted the VS-820 branch February 14, 2023 18:26
This was referenced Mar 17, 2023
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4 participants