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Incorporate build.gradle changes from gvs #8249

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Mar 21, 2023
Merged

Incorporate build.gradle changes from gvs #8249

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7 changes: 5 additions & 2 deletions build.gradle
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Original file line number Diff line number Diff line change
Expand Up @@ -64,6 +64,7 @@ final hadoopVersion = System.getProperty('hadoop.version', '3.3.1')
final disqVersion = System.getProperty('disq.version','0.3.6')
final genomicsdbVersion = System.getProperty('genomicsdb.version','1.4.4')
final bigQueryVersion = System.getProperty('bigQuery.version', '2.9.0')
final bigQueryStorageVersion = System.getProperty('bigQueryStorage.version', '2.9.1')
final guavaVersion = System.getProperty('guava.version', '31.0.1-jre')
final log4j2Version = System.getProperty('log4j2Version', '2.17.1')
final testNGVersion = '7.0.0'
Expand Down Expand Up @@ -252,7 +253,7 @@ dependencies {
implementation(googleCloudNioDependency)

implementation 'com.google.cloud:google-cloud-bigquery:' + bigQueryVersion
implementation 'com.google.cloud:google-cloud-bigquerystorage:2.9.1'
implementation 'com.google.cloud:google-cloud-bigquerystorage:' + bigQueryStorageVersion

implementation "gov.nist.math.jama:gov.nist.math.jama:1.1.1"

Expand Down Expand Up @@ -323,6 +324,7 @@ dependencies {
implementation('org.apache.hadoop:hadoop-client:' + hadoopVersion) // should be a 'provided' dependency
implementation('com.github.jsr203hadoop:jsr203hadoop:1.0.3')

implementation('org.apache.orc:orc:1.6.5')
implementation('de.javakaffee:kryo-serializers:0.45') {
exclude module: 'kryo' // use Spark's version
}
Expand All @@ -348,7 +350,7 @@ dependencies {

// Required for COSMIC Funcotator data source:
implementation 'org.xerial:sqlite-jdbc:3.36.0.3'

// natural sort
implementation('net.grey-panther:natural-comparator:1.1')
implementation('com.fasterxml.jackson.module:jackson-module-scala_2.12:2.9.8')
Expand Down Expand Up @@ -615,6 +617,7 @@ task collectBundleIntoDir(type: Copy) {

task bundle(type: Zip) {
dependsOn collectBundleIntoDir
zip64 true

archiveBaseName = project.name + "-" + project.version
destinationDirectory = file("$buildDir")
Expand Down