Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[DFE-761] Remove GvsAoUReblockGVCF.wdl #8300

Merged
merged 1 commit into from
May 2, 2023

Conversation

mmorgantaylor
Copy link
Member

The WDL GvsAoUReblockGVCF contains logic specific to AoU and as such does not belong in gatk (or warp). It is being added to the broadinstitute/hops-aou-drc repo.

Jira ticket: https://broadworkbench.atlassian.net/browse/DFE-761
PR in hops-aou-drc: https://github.com/broadinstitute/hops-aou-drc/pull/148

@codecov
Copy link

codecov bot commented Apr 28, 2023

Codecov Report

❗ No coverage uploaded for pull request base (ah_var_store@daeae13). Click here to learn what that means.
The diff coverage is n/a.

Additional details and impacted files
@@               Coverage Diff                @@
##             ah_var_store     #8300   +/-   ##
================================================
  Coverage                ?   84.201%           
  Complexity              ?     34893           
================================================
  Files                   ?      2197           
  Lines                   ?    167119           
  Branches                ?     18007           
================================================
  Hits                    ?    140716           
  Misses                  ?     20123           
  Partials                ?      6280           

Copy link

@koncheto-broad koncheto-broad left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM

I hope it has a happy life with its new family 🥺

@mmorgantaylor mmorgantaylor merged commit 6dc27f0 into ah_var_store May 2, 2023
@mmorgantaylor mmorgantaylor deleted the mma_dfe-761_remove_aou_reblocking_wdl branch May 2, 2023 13:49
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants