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  • Broad Institute

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Achievement: Pair ExtraordinaireAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Achievements

Achievement: Pair ExtraordinaireAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3
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  1. broadinstitute/gatk broadinstitute/gatk Public

    Official code repository for GATK versions 4 and up

    Java 1.6k 580

  2. samtools/htsjdk samtools/htsjdk Public

    A Java API for high-throughput sequencing data (HTS) formats.

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  3. broadinstitute/barclay broadinstitute/barclay Public

    Command line argument parser and online documentation generation utilities for java command line programs.

    Java 8 6

  4. broadinstitute/picard broadinstitute/picard Public

    A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

    Java 954 366

  5. samtools/hts-specs samtools/hts-specs Public

    Specifications of SAM/BAM and related high-throughput sequencing file formats

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  6. bramtools bramtools Public

    Playground for genomics using Rust.

    Rust