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@cpathology

CHEN

Computational Heterogeneous Evolutionary Neoplasia
README.md

CellInteraction 🎯 CHEN strives to systematically characterize the tumor immune microenvironment, for an in-depth understanding of tumor heterogeneities and the neoplasm evolution from preneoplastic lesions, to localized and ultimately metastatic tumors, by developing innovative computational frameworks to interrogate large-scale pathology slides, and their integration with clinicodemographic profiles, multi-omics, etc.

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  1. FUC-CHEN FUC-CHEN Public

    Forked from PingjunChen/FUC

    Frequently Used Commands for CHEN

    Dockerfile

  2. NucleiSegHE NucleiSegHE Public

    H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net

    Python 6 3

  3. Pyramidal-TIFF Pyramidal-TIFF Public

    Convert Slides/Images to Pyramidal TIFF Format

    Python 4 2

  4. LungEvolutionPathomics LungEvolutionPathomics Public

    Lung Preneoplasia Progression via Pathomics

    Python 1

Repositories

Showing 7 of 7 repositories
  • HoverFast Public Forked from choosehappy/HoverFast

    Blazing fast nuclei segmentation for brightfield Whole Slide Images

    cpathology/HoverFast’s past year of commit activity
    Python 0 BSD-3-Clause 3 0 0 Updated Jul 19, 2024
  • .github Public

    About CHEN

    cpathology/.github’s past year of commit activity
    0 0 0 0 Updated Jul 13, 2024
  • CPath_SABenchmark Public Forked from fuchs-lab-public/CPath_SABenchmark

    Slide tile embedding aggregation benchmarking

    cpathology/CPath_SABenchmark’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Jul 8, 2024
  • LungEvolutionPathomics Public

    Lung Preneoplasia Progression via Pathomics

    cpathology/LungEvolutionPathomics’s past year of commit activity
    Python 1 BSD-3-Clause 0 0 0 Updated Nov 26, 2023
  • NucleiSegHE Public

    H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net

    cpathology/NucleiSegHE’s past year of commit activity
    Python 6 BSD-3-Clause 3 0 0 Updated Jun 29, 2023
  • Pyramidal-TIFF Public

    Convert Slides/Images to Pyramidal TIFF Format

    cpathology/Pyramidal-TIFF’s past year of commit activity
    Python 4 BSD-3-Clause 2 0 0 Updated Apr 3, 2023
  • FUC-CHEN Public Forked from PingjunChen/FUC

    Frequently Used Commands for CHEN

    cpathology/FUC-CHEN’s past year of commit activity
    Dockerfile 0 BSD-3-Clause 2 0 0 Updated Dec 27, 2022

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