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Add per exon p-value and log2 fold changes to exon Excel output #48

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tjakobi opened this issue Dec 14, 2017 · 1 comment
Open

Add per exon p-value and log2 fold changes to exon Excel output #48

tjakobi opened this issue Dec 14, 2017 · 1 comment

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@tjakobi
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tjakobi commented Dec 14, 2017

Right now the Excel file could provide more detailed information that is scattered throughout different files. This information should be unified in the produced .XLS file.

Bonus points: can we also incorporate newly detected exons from the reconstruct/FUCHS module?

@tjakobi tjakobi added this to the Version 1.2.0 milestone Dec 14, 2017
@tjakobi tjakobi self-assigned this Dec 14, 2017
@tjakobi tjakobi removed the exon label Dec 18, 2017
tjakobi added a commit that referenced this issue Dec 18, 2017
@tjakobi
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tjakobi commented Jan 12, 2018

Addressing the bonus point of FUCHS exons: This might be a more complex task since the script directly reads the ballgown output and currently does not add any other annotation to the data. I assume we would have to re-create the ballgown data with the added exons first instead of try to merge information later.

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