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diff --git a/README.md b/README.md
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-European Materials and Modelling Ontology (EMMO)
-================================================
-EMMO is a multidisciplinary effort to develop a standard
-representational framework (the ontology) based on current materials
-modelling knowledge, including physical sciences, analytical
-philosophy and information and communication technologies.  This
-multidisciplinarity is illustrated by the figure on the title page.
-It provides the connection between the physical world, materials
-characterisation world and materials modelling world.
+# The European Materials Modelling Ontology (EMMO)
+
+## About
+EMMO is a multidisciplinary effort to develop a standard representational framework (the ontology) based on current materials modelling knowledge, including physical sciences, analytical philosophy and information and communication technologies. This multidisciplinarity is illustrated by the figure on the title page. It provides the connection between the physical world, materials characterisation world and materials modelling world.
 
 EMMO is released under a [Creative Commons license](LICENSE.md).
 
-The OWL sources are available in turtle format in the [emmo](emmo) subfolder.
+## Repository Description
+You can find the EMMO ontology at http://emmo.info/emmo.owl
+
+The basic structure of the EMMO is declared in the [base](base) subfolder, and collected by the [emmo-base](emmo-base.owl) ontology.
+
+The main perspectives used by the EMMO for real world objects representation are declared in the [perspectives](perspectives) subfolder, and collected by the [emmo-perspectives](emmo-perspectives.owl) ontology.
+
+The root classes of the domains that are actually addressed by the EMMO (and in development by several H2020 projects initiatives) are declared in the [domains](domains) subfolder, and collected by the [emmo](emmo.owl) ontology.
+
+The OWL2-DL sources are available in RDF/XML format.
+
+## How To Use It
+In order to be able to view and navigate the EMMO ontology we recommend to download the Protégé editor at https://protege.stanford.edu/products.php#desktop-protege
+
+The fastest way to access the EMMO is to open the ontology via Protégé via the menu under *File -> Open from URL...* and copy the URL http://emmo.info/emmo.owl: Protégé will automatically download all the necessary dependencies.
+
+The EMMO hierarchy will be visible only after reasoning inference: use *ctrl-R* to start the reasoner and under the *Entities* tab, select the *Classes* subtab and *Inferred* in the scroll button.
+
+It is recommended to use FaCT++ as reasoner. You can select it through the menu *Reasoner*.
+
+## Contacts:
+Emanuele Ghedini
+University of Bologna (IT)
+email: [email protected]
+
+Gerhard Goldbeck
+Goldbeck Consulting Ltd (UK)
+email: [email protected]
+
+### Acknowledgement
+This work is conducted under the framework of the [SimDOME](https://simdome.eu) project (2019-2023), that receives funding from the European Union’s Horizon 2020 Research and Innovation Programme, under Grant Agreement n. 814492
+
+This work was conducted under the framework of the [EMMC-CSA](https://emmc.info) project (2016-2019), that has received funding from the European Union’s Horizon 2020 Research and Innovation Programme, under Grant Agreement n. 723867
+
+This work was conducted using the Protégé resource, which is supported by grant GM10331601 from the National Institute of General Medical Sciences of the United States National Institutes of Health.
diff --git a/base/catalog-v001.xml b/base/catalog-v001.xml
@@ -0,0 +1,13 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<catalog prefer="public" xmlns="urn:oasis:names:tc:entity:xmlns:xml:catalog">
+    <uri id="Imports Wizard Entry" name="http://emmo.info/base/emmo-mereotopology.owl" uri="../base/emmo-mereotopology.owl"/>
+    <uri id="Imports Wizard Entry" name="http://emmo.info/base/emmo-4d.owl" uri="../base/emmo-4d.owl"/>
+    <uri id="Imports Wizard Entry" name="http://emmo.info/base/emmo-physical.owl" uri="../base/emmo-physical.owl"/>
+    <uri id="Imports Wizard Entry" name="http://emmo.info/base/emmo-annotations.owl" uri="../base/emmo-annotations.owl"/>
+    <group id="Folder Repository, directory=, recursive=true, Auto-Update=true, version=2" prefer="public" xml:base="">
+        <uri id="Automatically generated entry, Timestamp=1575051255981" name="http://emmo.info/base/emmo-4d.owl" uri="emmo-4d.owl"/>
+        <uri id="Automatically generated entry, Timestamp=1575051255981" name="http://emmo.info/base/emmo-annotations.owl" uri="emmo-annotations.owl"/>
+        <uri id="Automatically generated entry, Timestamp=1575051255981" name="http://emmo.info/base/emmo-mereotopology.owl" uri="emmo-mereotopology.owl"/>
+        <uri id="Automatically generated entry, Timestamp=1575051255981" name="http://emmo.info/base/emmo-physical.owl" uri="emmo-physical.owl"/>
+    </group>
+</catalog>
diff --git a/base/emmo-4d.owl b/base/emmo-4d.owl
@@ -0,0 +1,93 @@
+<?xml version="1.0"?>
+<rdf:RDF xmlns="http://emmo.info/base/emmo-4d.owl#"
+     xml:base="http://emmo.info/base/emmo-4d.owl"
+     xmlns:owl="http://www.w3.org/2002/07/owl#"
+     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
+     xmlns:xml="http://www.w3.org/XML/1998/namespace"
+     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
+     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
+     xmlns:emmo-annotations="http://emmo.info/base/emmo-annotations.owl#">
+    <owl:Ontology rdf:about="http://emmo.info/base/emmo-4d.owl">
+        <owl:imports rdf:resource="http://emmo.info/base/emmo-mereotopology.owl"/>
+        <emmo-annotations:EMMO_5525a055_dda5_4556_8b91_f0d22fa676cc>EMMO is released under a Creative Commons license Attribution 4.0 International (CC BY 4.0)
+
+https://creativecommons.org/licenses/by/4.0/legalcode</emmo-annotations:EMMO_5525a055_dda5_4556_8b91_f0d22fa676cc>
+        <emmo-annotations:EMMO_cd5fb112_7ee7_4120_a35d_3ca3e6c3f4ab>Emanuele Ghedini (University of Bologna, IT)
+Gerhard Goldbeck (GCL Ltd, UK)
+Adham Hashibon (Fraunhofer IWM, DE)
+Georg Schmitz (Access, DE)
+Jesper Friis (SINTEF, NO)</emmo-annotations:EMMO_cd5fb112_7ee7_4120_a35d_3ca3e6c3f4ab>
+        <rdfs:comment>Contacts:
+Gerhard Goldbeck
+Goldbeck Consulting Ltd (UK)
+email: [email protected]
+
+Emanuele Ghedini
+University of Bologna (IT)
+email: [email protected]</rdfs:comment>
+        <rdfs:comment>European Materials and Modelling Ontology (EMMO)
+
+EMMO is a multidisciplinary effort to develop a standard representational framework (the ontology) based on current materials modelling knowledge, including physical sciences, analytical philosophy and information and communication technologies. 
+
+It provides the connection between the physical world, materials characterisation world and materials modelling world.</rdfs:comment>
+        <rdfs:comment>The EMMO requires FacT++ reasoner plugin in order to visualize all inferences and class hierarchy (ctrl+R hotkey in Protege).</rdfs:comment>
+        <owl:versionInfo>The European Materials Modelling Ontology
+
+Version 0.9.10</owl:versionInfo>
+    </owl:Ontology>
+
+
+
+    <!-- 
+    ///////////////////////////////////////////////////////////////////////////////////////
+    //
+    // Object Properties
+    //
+    ///////////////////////////////////////////////////////////////////////////////////////
+     -->
+
+
+
+
+    <!-- http://emmo.info/base/emmo-4d.owl#EMMO_6e046dd0_9634_4013_b2b1_9cc468087c83 -->
+
+    <owl:ObjectProperty rdf:about="http://emmo.info/base/emmo-4d.owl#EMMO_6e046dd0_9634_4013_b2b1_9cc468087c83">
+        <rdfs:subPropertyOf rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_9380ab64_0363_4804_b13f_3a8a94119a76"/>
+        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
+        <rdfs:domain rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_eb3a768e_d53e_4be9_a23b_0714833c36de"/>
+        <rdfs:range rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_eb3a768e_d53e_4be9_a23b_0714833c36de"/>
+        <emmo-annotations:EMMO_967080e5_2f42_4eb2_a3a9_c58143e835f9>A relation that isolates a proper part that extends itself in time through a portion of the lifetime whole.</emmo-annotations:EMMO_967080e5_2f42_4eb2_a3a9_c58143e835f9>
+        <rdfs:label xml:lang="en">has_spatio-temporal_part</rdfs:label>
+    </owl:ObjectProperty>
+
+
+
+    <!-- http://emmo.info/base/emmo-4d.owl#EMMO_f68030be_94b8_4c61_a161_886468558054 -->
+
+    <owl:ObjectProperty rdf:about="http://emmo.info/base/emmo-4d.owl#EMMO_f68030be_94b8_4c61_a161_886468558054">
+        <rdfs:subPropertyOf rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_9380ab64_0363_4804_b13f_3a8a94119a76"/>
+        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
+        <rdfs:domain rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_eb3a768e_d53e_4be9_a23b_0714833c36de"/>
+        <rdfs:range rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_eb3a768e_d53e_4be9_a23b_0714833c36de"/>
+        <emmo-annotations:EMMO_967080e5_2f42_4eb2_a3a9_c58143e835f9>A relation that isolates a proper part that extends itself in time within the lifetime of the whole, without covering the full spatial extension of the 4D whole (i.e. is not a temporal part).</emmo-annotations:EMMO_967080e5_2f42_4eb2_a3a9_c58143e835f9>
+        <rdfs:label xml:lang="en">has_spatial_part</rdfs:label>
+    </owl:ObjectProperty>
+
+
+
+    <!-- http://emmo.info/base/emmo-mereotopology.owl#EMMO_7afbed84_7593_4a23_bd88_9d9c6b04e8f6 -->
+
+    <owl:ObjectProperty rdf:about="http://emmo.info/base/emmo-mereotopology.owl#EMMO_7afbed84_7593_4a23_bd88_9d9c6b04e8f6">
+        <rdfs:subPropertyOf rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_9380ab64_0363_4804_b13f_3a8a94119a76"/>
+        <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
+        <rdfs:domain rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_eb3a768e_d53e_4be9_a23b_0714833c36de"/>
+        <rdfs:range rdf:resource="http://emmo.info/base/emmo-mereotopology.owl#EMMO_eb3a768e_d53e_4be9_a23b_0714833c36de"/>
+        <emmo-annotations:EMMO_967080e5_2f42_4eb2_a3a9_c58143e835f9>A relation that isolate a proper part that covers the total spatial extension of a whole within a time interval.</emmo-annotations:EMMO_967080e5_2f42_4eb2_a3a9_c58143e835f9>
+        <rdfs:label xml:lang="en">has_temporal_part</rdfs:label>
+    </owl:ObjectProperty>
+</rdf:RDF>
+
+
+
+<!-- Generated by the OWL API (version 4.5.9.2019-02-01T07:24:44Z) https://github.com/owlcs/owlapi -->
+
diff --git a/base/emmo-annotations.owl b/base/emmo-annotations.owl
@@ -0,0 +1,97 @@
+<?xml version="1.0"?>
+<rdf:RDF xmlns="http://emmo.info/base/emmo-annotations.owl#"
+     xml:base="http://emmo.info/base/emmo-annotations.owl"
+     xmlns:owl="http://www.w3.org/2002/07/owl#"
+     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
+     xmlns:xml="http://www.w3.org/XML/1998/namespace"
+     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
+     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
+     xmlns:emmo-annotations="http://emmo.info/base/emmo-annotations.owl#">
+    <owl:Ontology rdf:about="http://emmo.info/base/emmo-annotations.owl">
+            <emmo-annotations:EMMO_5525a055_dda5_4556_8b91_f0d22fa676cc>EMMO is released under a Creative Commons license Attribution 4.0 International (CC BY 4.0)
+
+https://creativecommons.org/licenses/by/4.0/legalcode</emmo-annotations:EMMO_5525a055_dda5_4556_8b91_f0d22fa676cc>
+        <emmo-annotations:EMMO_cd5fb112_7ee7_4120_a35d_3ca3e6c3f4ab>Emanuele Ghedini (University of Bologna, IT)
+Gerhard Goldbeck (GCL Ltd, UK)
+Adham Hashibon (Fraunhofer IWM, DE)
+Georg Schmitz (Access, DE)
+Jesper Friis (SINTEF, NO)</emmo-annotations:EMMO_cd5fb112_7ee7_4120_a35d_3ca3e6c3f4ab>
+        <rdfs:comment>Contacts:
+Gerhard Goldbeck
+Goldbeck Consulting Ltd (UK)
+email: [email protected]
+
+Emanuele Ghedini
+University of Bologna (IT)
+email: [email protected]</rdfs:comment>
+        <rdfs:comment>European Materials and Modelling Ontology (EMMO)
+
+EMMO is a multidisciplinary effort to develop a standard representational framework (the ontology) based on current materials modelling knowledge, including physical sciences, analytical philosophy and information and communication technologies. 
+
+It provides the connection between the physical world, materials characterisation world and materials modelling world.</rdfs:comment>
+        <rdfs:comment>The EMMO requires FacT++ reasoner plugin in order to visualize all inferences and class hierarchy (ctrl+R hotkey in Protege).</rdfs:comment>
+        <owl:versionInfo>The European Materials Modelling Ontology
+
+Version 0.9.10</owl:versionInfo>
+    </owl:Ontology>
+
+    <!-- 
+    ///////////////////////////////////////////////////////////////////////////////////////
+    //
+    // Annotation properties
+    //
+    ///////////////////////////////////////////////////////////////////////////////////////
+     -->
+
+
+
+
+    <!-- http://emmo.info/base/emmo-annotations.owl#EMMO_5525a055_dda5_4556_8b91_f0d22fa676cc -->
+
+    <owl:AnnotationProperty rdf:about="http://emmo.info/base/emmo-annotations.owl#EMMO_5525a055_dda5_4556_8b91_f0d22fa676cc">
+        <rdfs:label xml:lang="en">license</rdfs:label>
+        <rdfs:subPropertyOf rdf:resource="http://www.w3.org/2000/01/rdf-schema#comment"/>
+    </owl:AnnotationProperty>
+
+
+
+    <!-- http://emmo.info/base/emmo-annotations.owl#EMMO_70fe84ff_99b6_4206_a9fc_9a8931836d84 -->
+
+    <owl:AnnotationProperty rdf:about="http://emmo.info/base/emmo-annotations.owl#EMMO_70fe84ff_99b6_4206_a9fc_9a8931836d84">
+        <rdfs:label xml:lang="en">definition</rdfs:label>
+        <rdfs:subPropertyOf rdf:resource="http://www.w3.org/2000/01/rdf-schema#comment"/>
+    </owl:AnnotationProperty>
+
+
+
+    <!-- http://emmo.info/base/emmo-annotations.owl#EMMO_967080e5_2f42_4eb2_a3a9_c58143e835f9 -->
+
+    <owl:AnnotationProperty rdf:about="http://emmo.info/base/emmo-annotations.owl#EMMO_967080e5_2f42_4eb2_a3a9_c58143e835f9">
+        <rdfs:label xml:lang="en">elucidation</rdfs:label>
+        <rdfs:subPropertyOf rdf:resource="http://www.w3.org/2000/01/rdf-schema#comment"/>
+    </owl:AnnotationProperty>
+
+
+
+    <!-- http://emmo.info/base/emmo-annotations.owl#EMMO_b432d2d5_25f4_4165_99c5_5935a7763c1a -->
+
+    <owl:AnnotationProperty rdf:about="http://emmo.info/base/emmo-annotations.owl#EMMO_b432d2d5_25f4_4165_99c5_5935a7763c1a">
+        <rdfs:label xml:lang="en">example</rdfs:label>
+        <rdfs:subPropertyOf rdf:resource="http://www.w3.org/2000/01/rdf-schema#comment"/>
+    </owl:AnnotationProperty>
+
+
+
+    <!-- http://emmo.info/base/emmo-annotations.owl#EMMO_cd5fb112_7ee7_4120_a35d_3ca3e6c3f4ab -->
+
+    <owl:AnnotationProperty rdf:about="http://emmo.info/base/emmo-annotations.owl#EMMO_cd5fb112_7ee7_4120_a35d_3ca3e6c3f4ab">
+        <rdfs:label xml:lang="en">author</rdfs:label>
+        <rdfs:subPropertyOf rdf:resource="http://www.w3.org/2000/01/rdf-schema#comment"/>
+    </owl:AnnotationProperty>
+
+</rdf:RDF>
+
+
+
+<!-- Generated by the OWL API (version 4.5.9.2019-02-01T07:24:44Z) https://github.com/owlcs/owlapi -->
+