scCoAnnotate v3.0.2

• Bug fix (ontology)

scCoAnnotate v3.0.1

• Bug fixes
• Updated plots in annotation notebook

scCoAnnotate v3.0.0

• Updated structure of config file
• Weighted consensus with CAWPE: https://link.springer.com/article/10.1007/s10618-019-00638-y
• Compute consensus in higher ontology level
• New tools: Symphony, CellBlast, scPoli, scANVI, Seurat
• Downsample reference

scCoAnnotate v2.0.3

• New figures in report + fixed colour scales
• Additional options for consensus

scCoAnnotate v2.0.2

• fixed bug related to switch from unsure to unresolved in annotation notebook

scCoAnnotate v2.0.1

• Bug in preprocessing script fixed

scCoAnnotate v2.0

• Training and prediction split
• Benchmarking workflow implemented for all tools
• New tools added
• Output html report
• Parallelized over references and queries
• Gene conversion updated
• Parameters for tools added to config
• Normalization corrected
• Documentation updated