Releases: fungenomics/scCoAnnotate
Releases · fungenomics/scCoAnnotate
scCoAnnotate v3.0.2
- Bug fix (ontology)
scCoAnnotate v3.0.1
- Bug fixes
- Updated plots in annotation notebook
scCoAnnotate v3.0.0
- Updated structure of config file
- Weighted consensus with CAWPE: https://link.springer.com/article/10.1007/s10618-019-00638-y
- Compute consensus in higher ontology level
- New tools: Symphony, CellBlast, scPoli, scANVI, Seurat
- Downsample reference
scCoAnnotate v2.0.3
- New figures in report + fixed colour scales
- Additional options for consensus
scCoAnnotate v2.0.2
- fixed bug related to switch from unsure to unresolved in annotation notebook
scCoAnnotate v2.0.1
- Bug in preprocessing script fixed
scCoAnnotate v2.0
- Training and prediction split
- Benchmarking workflow implemented for all tools
- New tools added
- Output html report
- Parallelized over references and queries
- Gene conversion updated
- Parameters for tools added to config
- Normalization corrected
- Documentation updated