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1. BCR_LCP_GSA BCR_LCP_GSA Public

   Multi-string eBWT/LCP/GSA computation

   C++ 5 1

2. FASTQcompression FASTQcompression Public

   FASTQcompression (Compressor of FASTQ files)

   C++ 3 2

3. cLCP-mACS cLCP-mACS Public

   Efficient lightweight strategy to solve the multi-string Average Common Substring (ACS) problem, that consists in the pairwise comparison of a single string against a collection of m strings simult…

   C++ 2

4. bwt2lcp bwt2lcp Public

   Forked from nicolaprezza/bwt2lcp

   Compute the LCP array from the BWT of a set of DNA strings.

   C++ 1

5. ebwt2InDel ebwt2InDel Public

   Forked from nicolaprezza/ebwt2InDel

   ebwt2InDel: find SNPs and InDels from the BWT of a fasta read set

   C++

6. cLCP-mACS_parallel cLCP-mACS_parallel Public

   Efficient parallel construction of the colored longest common prefix array

   C++