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[Tools] miRanda: An miRNA target scanner that aims to predict mRNA targets for microRNAs using dynamic-programming alignment and thermodynamics
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miRanda: An miRNA target scanner that aims to predict mRNA targets for microRNAs using dynamic-programming alignment and thermodynamics Authors: Anton Enright, Bino John, Chris Sander and Debora Marks ([email protected] - to all authors) Software written by: Anton Enright ([email protected]) Copyright (C) (2003) Memorial Sloan-Kettering Cancer Center If you use this program in your research then please cite: Enright AJ, John B, Gaul U, Tuschl T, Sander C and Marks DS; (2003) Genome Biology; 5(1):R1. Distributed under GNU Public License (GPL) see the files COPYING and LICENSE for details. ------------------------------------------------------------------------------- Simple installation instructions are contained in the file INSTALL. To Compile do: ./configure --prefix=/place/to/install then: make install This will place the miranda binary in: /place/to/install/bin/miranda For information on how to use miranda type: miranda --help Documentation is contained in the 'man' subdirectory. Some Example files are contained in the 'examples' subdirectory ------------------------------------------------------------------------------- Additional software for post-processing miRanda output and cross-species conservation analysis may be made available upon request. This software will be further developed under the open source model, coordinated by Anton Enright and Chris Sander ([email protected]). Please send bug reports to: [email protected] The miranda website is at: http://www.microrna.org/
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[Tools] miRanda: An miRNA target scanner that aims to predict mRNA targets for microRNAs using dynamic-programming alignment and thermodynamics
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