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@igvteam

igvteam

Github repository for the Integrative Genomics Viewer (IGV) team.

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  1. igv.js igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    HTML 640 226

  2. igv-webapp igv-webapp Public

    IGV Web App

    JavaScript 114 42

  3. igv igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    Java 634 379

  4. igv-reports igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    Python 343 51

  5. igv-notebook igv-notebook Public

    Module for embedding igv.js in an IPython notebook

    JavaScript 60 14

  6. juicebox.js juicebox.js Public

    HiC contact matrix visualization

    JavaScript 19 13

Repositories

Showing 10 of 37 repositories
  • igv Public

    Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

    igvteam/igv’s past year of commit activity
    Java 634 MIT 379 136 0 Updated Sep 15, 2024
  • igv-reports Public

    Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

    igvteam/igv-reports’s past year of commit activity
    Python 343 MIT 51 0 0 Updated Sep 13, 2024
  • spacewalk Public

    Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js and juicebox.js instances for rapid and intuitive visual comparison and interaction between 3D data and 1D genomic data.

    igvteam/spacewalk’s past year of commit activity
    JavaScript 10 MIT 1 1 0 Updated Sep 12, 2024
  • igv-docs Public

    Markdown-based documentation website - IGV desktop application

    igvteam/igv-docs’s past year of commit activity
    JavaScript 4 1 1 0 Updated Sep 10, 2024
  • igv.js Public

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    igvteam/igv.js’s past year of commit activity
    HTML 640 MIT 226 70 2 Updated Sep 9, 2024
  • igv-webapp Public

    IGV Web App

    igvteam/igv-webapp’s past year of commit activity
    JavaScript 114 MIT 42 6 0 Updated Sep 5, 2024
  • juicebox.js Public

    HiC contact matrix visualization

    igvteam/juicebox.js’s past year of commit activity
    JavaScript 19 MIT 13 21 0 Updated Sep 4, 2024
  • igv.js-flask Public

    Example project for integrating igv.js and flask

    igvteam/igv.js-flask’s past year of commit activity
    Python 26 MIT 15 1 2 Updated Sep 3, 2024
  • igv.js-docs Public
    igvteam/igv.js-docs’s past year of commit activity
    JavaScript 0 0 1 0 Updated Aug 22, 2024
  • data-modal Public

    A data resource browser and selector based on DataTables. Used by igv applications for selecting files from ENCODE and other data resources.

    igvteam/data-modal’s past year of commit activity
    JavaScript 2 MIT 2 0 0 Updated Aug 10, 2024
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