Fixed hcat.lib.utils.load not auto max projecting the input image

indzhykulianlab · Oct 31, 2022 · 0d258d6 · 0d258d6
1 parent 926baef
commit 0d258d6
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/hcat/lib/utils.py b/hcat/lib/utils.py
@@ -281,7 +281,7 @@ def load(file: str, header_name: Optional[str] = 'TileScan 1 Merged',
         image_base = io.imread(file)
 
         if image_base.ndim == 4:
-            image_base = image_base.transpose((-1, 1, 2, 0))
+            image_base = image_base.transpose((-1, 1, 2, 0)).max(-1)
 
         elif image_base.ndim == 3 and np.array(
                 image_base.shape).min() > 4:  # Suppose you load a 3D image with one channel.