Skip to content
@inscopix

Inscopix

Popular repositories

  1. inscopix-cnmfe inscopix-cnmfe Public

    Algorithm for automated source extraction from 1P data

    Jupyter Notebook 19 5

  2. pyisx pyisx Public

    Experimentlal pure-python API to read Inscopix data

    Python 6 2

  3. CNMF_E CNMF_E Public

    Forked from zhoupc/CNMF_E

    Constrained Nonnegative Matrix Factorization for microEndoscopic data

    MATLAB 2 1

  4. CaImAn CaImAn Public

    Forked from flatironinstitute/CaImAn

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    Python 2 1

  5. isx-cnmfe-wrapper isx-cnmfe-wrapper Public

    Code to call CNMFe through CaImAn or MATLAB

    MATLAB 2

  6. mpl_moviemaker mpl_moviemaker Public

    Wrapper for the Matplotlib Animation class that facilitates movie generation

    Jupyter Notebook 1

Repositories

Showing 10 of 16 repositories
  • isxSuite2p Public Forked from MouseLand/suite2p

    cell detection in calcium imaging recordings

    inscopix/isxSuite2p’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 239 0 0 Updated Aug 28, 2024
  • ideas-public-python-utils Public

    Core utils and functions for IDEAS open source containers

    inscopix/ideas-public-python-utils’s past year of commit activity
    Python 0 0 0 0 Updated Aug 27, 2024
  • pyisx Public

    Experimentlal pure-python API to read Inscopix data

    inscopix/pyisx’s past year of commit activity
    Python 6 2 10 2 Updated Jul 9, 2024
  • ideas-toolbox-public-template Public
    inscopix/ideas-toolbox-public-template’s past year of commit activity
    Makefile 1 0 0 0 Updated May 1, 2024
  • CaImAn Public Forked from flatironinstitute/CaImAn

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    inscopix/CaImAn’s past year of commit activity
    Python 2 GPL-2.0 365 0 0 Updated Apr 18, 2024
  • HeatMaps Public Forked from lizard1111/HeatMaps

    Grid of heatmaps with time-sensitive correlations

    inscopix/HeatMaps’s past year of commit activity
    Python 0 1 0 0 Updated Jan 9, 2024
  • ideas-example-tool Public

    Simple python functions for eventual encapsulation in IDEAS

    inscopix/ideas-example-tool’s past year of commit activity
    Python 1 0 0 0 Updated Jan 3, 2024
  • inscopix-cnmfe Public

    Algorithm for automated source extraction from 1P data

    inscopix/inscopix-cnmfe’s past year of commit activity
    Jupyter Notebook 19 AGPL-3.0 5 4 0 Updated Jun 16, 2023
  • mpl_moviemaker Public

    Wrapper for the Matplotlib Animation class that facilitates movie generation

    inscopix/mpl_moviemaker’s past year of commit activity
    Jupyter Notebook 1 0 1 0 Updated Oct 12, 2022
  • isx-video-labeler Public Forked from shayqn/video-labeler

    Simple Python approach to manually labeling video frames to generate training data for supervised machine learning models.

    inscopix/isx-video-labeler’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Feb 11, 2022
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…