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Single-cell visualization and exploration tool for researchers and biologists.

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Scalpl-Vis

A visualization tool of processed single-cell data for researchers and biologists with a very user-friendly and easy to use GUI.

Requirements

Scanpy(processing file data and plotting), FBS(packaging), PyQt5(GUI)

Instructions

Clone or download repo
Start a virtual environment
Use pip3 install scanpy and pip3 install pyqt5 pip3 install fbs to get the required libraries.
Run fbs run or navigate to src/main/python and run python3 main.py

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Single-cell visualization and exploration tool for researchers and biologists.

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