A pipeline for analising differential expression data.
Place your .fastq
files into the data/
directory
and execute:
$ condor submit
Your cont files will be on results/
when the process ends.
NPROC
environment variable can be specified to run multiple processes simultaneously.
OPTS
environment variable can be set to alter the execution parameters.
REFERENCE
environment variable can be set to select which reference genome will be in use.
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