An awesome scratch analysis software!
A wound healing assay is a laboratory technique used to study cell migration and cell–cell interaction. This is also called a scratch assay. This application does the analysis scratch assay.
To get a local copy up and running follow these simple example steps.
- Clone the repo
git clone https://github.com/mberkay0/wounderful.git
- Check if you have a virtual env
virtualenv --version
- If (not Installed)
pip install virtualenv
- Now create a virtual env in cd wounderful/
virtualenv venv
- Activate a venv
~/venv/Scripts/activate
- Then download a python modules
pip install -r requirements.txt
- Ok we cool now start a project
python manage.py makemigrations
python manage.py migrate
python manage.py runserver
Add a wound healing data-set
Run a script
Check analysis
And download a labelled images
Check the labelled images
@INPROCEEDINGS{9299213,
author={Mayalı, Berkay and Şaylığ, Orkun and Özuysal, Özden Y. and Okvur, Devrim P. and Töreyin, Behçet Ugur and Ünay, Devrim},
booktitle={2020 Medical Technologies Congress (TIPTEKNO)},
title={Automated Analysis of Wound Healing Microscopy Image Series - A Preliminary Study},
year={2020},
pages={1-4},
doi={10.1109/TIPTEKNO50054.2020.9299213}
}
- Multiple dataset usage feature added and multiple analysis options added at the same time.
- Added a authentication system.
- The display feature of labelled frames in the program has been added.