Discussions

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  Only upto 8 % clonotype exported

  PavithraV0223 asked Sep 6, 2024 in Q&A · Unanswered

  

  

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  Missing tsv files in MiXCR 4.7.0 output for 10X GEX pipeline

  genome2020 started Sep 5, 2024 in General

  

  

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  Still have question with MiXCR gene library

  omegahh asked Aug 23, 2024 in Q&A · Answered

  

  

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  Importing new whitelist for parsebio protocols

  NBurnaevskiy started Jul 26, 2024 in General

  

  

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  High percentage of alignment failed due to no hits (not TCR/IG?) in 10X TCR data

  genome2020 started Aug 22, 2024 in General

  

  

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  Issue of mutationPositionPlot generation

  liu9756 started Aug 23, 2024 in General

  

  

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  Analysing BCR sequences

  ayeletperes asked Aug 11, 2024 in Q&A · Unanswered

  

  

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  neb-mouse-rna-xcr-umi-nebnext QC ALERT

  Victor-K27 asked Aug 31, 2024 in Q&A · Answered

  

  

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  BD Rhapsody VDJ v2 & VDJNext beads

  edyta-kowalczyk asked Aug 26, 2024 in Q&A · Unanswered

  

  

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  Alignment and germline gene inference on pre-processed data

  giulioisac asked May 23, 2024 in Q&A · Answered

  

  

  

  

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  MiXCR 4 equivalent of exportClones -n parameter in MiXCR 3

  abspangler13 asked Aug 20, 2024 in Q&A · Answered

  

  

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  No preset with name "kAligner2".

  Angieiscute asked Oct 31, 2023 in Q&A · Answered

  

  

  

  

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  Add sample info to 10x VDJ scRNA-seq data

  Celine-loves-coffee asked Aug 8, 2024 in Q&A · Answered

  

  

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  Mixcr to VDJtools

  pbpayal asked Apr 16, 2024 in Q&A · Closed · Answered

  

  

  

  

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  exportclone tsv not txt？vdjtools can‘t convert

  GANgan2022 asked Jun 5, 2023 in Q&A · Closed · Answered

  

  

  

  

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  mixcr with 10x Visium data

  lymphomatic asked Jul 24, 2024 in Q&A · Answered

  

  

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  What is IgGP?

  vincentwalter asked Aug 9, 2024 in Q&A · Answered

  

  

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  Han el all preset

  alexell22 asked Aug 3, 2024 in Q&A · Unanswered

  

  

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  Guidance on bulk BCR-seq analysis to quantify clonal sharing across samples

  laumonstre asked Aug 6, 2024 in Q&A · Answered

  

  

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  Pre-Clonotypes

  bshim181 asked Aug 5, 2024 in Q&A · Answered

  

  

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  mixcr exportClonesOverlap

  jum1996 asked Aug 6, 2024 in Q&A · Unanswered

  

  

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  Downsampling output missing

  lauratwomey asked Jul 31, 2024 in Q&A · Answered

  

  

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  overlapScatterPlot output correlation coefficient and p values

  lauratwomey asked Jul 31, 2024 in Q&A · Answered

  

  

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  QIAgen Targeted library

  GabyBG asked Jul 31, 2024 in Q&A · Answered

  

  

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  Long CDR3 sequences

  Januaryyiyue asked Jul 28, 2024 in Q&A · Answered

  

  

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