chore: build no-energy mmseqs pangraph

neherlab · Jul 13, 2022 · 6d5249c · 6d5249c
1 parent 5c790dd
commit 6d5249c
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/script/snakefile_panx b/script/snakefile_panx
@@ -21,6 +21,7 @@ ACCNUMS = {s: acc_nums(f"panx_data/{s}/input_GenBank") for s in SPECIES}
 
 ker_opt = {
     "mmseqs-full": "-k mmseqs -b 10",
+    "mmseqs-noenergy": "-k mmseqs -a 0 -b 0",
     "minimap20-full": "-k minimap2 -s 20",
     "minimap10-full": "-k minimap2 -s 10",
 }