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Parallel module exits with error, if the data are not in the same directory as the script #141
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Thanks for the report. I can confirm I see it and I will add a test case to the test suite capturing it |
luispedro
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Dec 4, 2020
This tests #141. From the original report: > Parallel module exits with error, if the data are not in the same > directory as the script. Running the parallel.ngl test exits with > error, if data is moved into a subfolder.
Thanks for the bug report. This is fixed on the development version and will be included in the next release. In the meanwhile, I hope you can find a quick workaround using symlinks or similar |
luispedro
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Jan 25, 2021
An accummulation of improvements rather than a big new feature is what triggers the new release. Full `ChangeLog`: - Better error message if the user attempts to use the non-existent <\> operator (suggest </>) - Add min-ngless-version field for modules - Add early check that block assignments are always to block variables - Use ZStd compression for temporary files from preprocess() - Correctly handle subpaths in samples for collect (fixes #141) - Add to_string() to int and double types (partially fixes #78 & fixes #81) - Add read_int() and read_double() functions (fixes #78)
luispedro
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Jan 26, 2021
An accummulation of improvements rather than a big new feature is what triggers the new release. Full `ChangeLog`: - Validate count() headers on --validate-only - Better error message if the user attempts to use the non-existent <\> operator (suggest </>) - Add min-ngless-version field for modules - Add early check that block assignments are always to block variables - Use ZStd compression for temporary files from preprocess() - Correctly handle subpaths in samples for collect (fixes #141) - Add to_string() to int and double types (partially fixes #78 & fixes #81) - Add read_int() and read_double() functions (fixes #78)
luispedro
added a commit
that referenced
this issue
Jan 26, 2021
An accummulation of improvements rather than a big new feature is what triggers the new release. Full `ChangeLog`: - Validate count() headers on --validate-only - Better error message if the user attempts to use the non-existent <\> operator (suggest </>) - Add min-ngless-version field for modules - Add early check that block assignments are always to block variables - Use ZStd compression for temporary files from preprocess() - Correctly handle subpaths in samples for collect (fixes #141) - Add to_string() to int and double types (partially fixes #78 & fixes #81) - Add read_int() and read_double() functions (fixes #78)
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Parallel module exits with error, if the data are not in the same directory as the script. Running the
parallel.ngl
test exits with error, if data is moved into a subfolder:sample.fq -> samle/sample.fq
. Seemingly unable to copy an existing file:The text was updated successfully, but these errors were encountered: