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Version 1.1.0

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@luispedro luispedro released this 24 Feb 08:54
v1.1.0

Many changes to the language and the internal code warrant a new release:

  • Fix CIGAR interpretation (#109) occurring when I is present
  • Call bwa mem so that it behaves in a deterministic way (independently of the number of threads used)
  • Add include_fragments option to orf_find()
  • Add early check for column headers in count()
  • Add sense argument to count()
  • Add line numbers to FastQ parsing errors
  • Fix __extra_args argument in map()
  • Add discard_singles function
  • Add interleaved option to fastq()
  • load_mocat_sample now fails if pair.2 exists but pair.1 doesn't
  • Reintroduce zstd compression (after fixes upstream)