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@oicr-gsi

Genome Sequence Informatics

Repositories for OICR's Genome Sequence Informatics team

Pinned

  1. shesmu shesmu Public

    Decision-driven action launching system

    Java 8 3

  2. djerba djerba Public

    Create cancer bioinformatics reports from metadata and workflow output

    Python 8 3

  3. vidarr vidarr Public

    Analysis provenance tracking server

    Java 1 1

  4. data_release data_release Public

    Scripts for releasing data generated at OICR to stakeholders

    Python

Repositories

Showing 10 of 228 repositories
  • shesmu Public

    Decision-driven action launching system

    oicr-gsi/shesmu’s past year of commit activity
    Java 8 MIT 3 0 1 Updated Sep 3, 2024
  • pinery-reports Public

    Reports based on data from Pinery

    oicr-gsi/pinery-reports’s past year of commit activity
    Java 0 LGPL-3.0 1 0 1 Updated Sep 3, 2024
  • Nextflow_WG_pipeline Public
    oicr-gsi/Nextflow_WG_pipeline’s past year of commit activity
    Nextflow 0 0 0 0 Updated Sep 3, 2024
  • sampuru Public

    Answers the question: "where's my sample?"

    oicr-gsi/sampuru’s past year of commit activity
    Java 0 0 0 0 Updated Sep 3, 2024
  • dimsum Public

    QC Tracking dashboard

    oicr-gsi/dimsum’s past year of commit activity
    Java 1 GPL-3.0 0 0 2 Updated Aug 30, 2024
  • djerba Public

    Create cancer bioinformatics reports from metadata and workflow output

    oicr-gsi/djerba’s past year of commit activity
    Python 8 GPL-3.0 3 4 5 Updated Aug 29, 2024
  • vidarr Public

    Analysis provenance tracking server

    oicr-gsi/vidarr’s past year of commit activity
    Java 1 MIT 1 0 0 Updated Aug 29, 2024
  • wgsPipeline Public archive
    oicr-gsi/wgsPipeline’s past year of commit activity
    0 0 0 0 Updated Aug 28, 2024
  • pinery Public

    A LIMS abstraction layer to provide generalized LIMS access via a web service.

    oicr-gsi/pinery’s past year of commit activity
    Java 1 GPL-3.0 0 0 2 Updated Aug 28, 2024
  • bclconvert Public

    Workflow to process a run directory through Dragen bclconvert

    oicr-gsi/bclconvert’s past year of commit activity
    WDL 0 0 0 0 Updated Aug 27, 2024
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