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  • Monash University
  • Melbourne

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  1. atacseq atacseq Public template

    Snakemake based pipeline for atacseq dataanalysis

    Python

  2. chipseq chipseq Public template

    A snakemake based workflow for ChIPSeq data analysis

    Python

  3. create-reference-indices create-reference-indices Public template

    A snakemake workflow to create reference indices and other supplementary files for analysis

    Python

  4. dnaseq dnaseq Public archive

    Snakemake based workflow for analysis of dnaseq data for calling germline/somatic mutations

    Python 2

  5. rnaseq rnaseq Public template

    Snakemake based pipeline for analysis of rnaseq data

    Python

  6. intron-retention-scripts intron-retention-scripts Public archive

    Scripts for intron retention analysis from RNA-Seq data

    Python 1 2