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Data Analysis for : Diverse Genes with Germline Variants Converging on p53 Network May Predispose to Solid Tumors in Children, Adolescents, and Young Adults

  • This github dir contains the data analysis jupyter notebooks, scripts and data tables accompaning the paper : Diverse Genes with Germline Variants Converging on p53 Network May Predispose to Solid Tumors in Children, Adolescents, and Young Adults
    • GermLine Analysis of Children, Adolescents, and Young Adults (C-AYA) with SolidTumor
  • Authors : Sara Akhavanfard, Roshan Padmanabhan, Lamis Yehia, Feixiong Cheng, Charis Eng

Contents

IVA Filteration Parameters


Analysis

Scripts

  • includes inhouse scipts to process and anlayze the data

Data

  • table dir contain the supplimentary excel files
  • Browse the data at SRA RunSelector
  • Summary List for project PRJNA559601 here