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salvadorlab/MetagenomicsToolsEvaluation
salvadorlab/MetagenomicsToolsEvaluation PublicThis repository contains scripts to run 9 different shotgun metagenomics profiling software on a rat tissue dataset as well as scripts for their downstream analysis (import into R, alpha/beta diver…
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Environmental_Lepto_detection
Environmental_Lepto_detection PublicComparing 3 different metagenomics approaches with ONT's long read sequencing method
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Norovirus_RNA_Seq
Norovirus_RNA_Seq PublicThis repo contains code to pre-process, quant, and analyze RNA-Seq data obtained from human enteriod cell cultures
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Norovirus_single_cell_RNA_seq
Norovirus_single_cell_RNA_seq PublicThis repo contains scripts to analyze Single-Cell RNA-Seq data obtained from human enteriod cell culture.
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