Running Supervised PCA

[adamgayoso]

Hello,

I'm interested in building my own CITE-seq reference using WNN and supervised PCA. However, I can't seem to find the function reference for RunSPCA in the docs, nor do I see how to compute it in the WNN or query mapping tutorials.

Any help is appreciated.

Update: I found it in the multimodal reference mapping tutorial, but it's pretty deep in there. I still don't see it in the docs I linked above, but can search it from google and get something that looks like seurat docs?

Thanks,
Adam

[saketkc]

Hi Adam, the documentation is here. It's missing from the reference because of a context missing, but should be in develop soon.

[timoast]

Just to add, you can find documentation for any function by typing ?<function_name> in R, eg ?RunSPCA

[adamgayoso]

Thanks, though I will say it would be nice to better highlight in the tutorials this functionality.