A pipeline to gather snoRNA and RBP interactions to perform a sno-RBP interaction network analysis.
Author: Kristina Sungeun Song
For a dry-run of this Snakemake workflow, simply run the following code from CRSSANT/
.
snakemake -n
To run this Snakemake workflow, simply run the following code from CRSSANT/
.
snakemake --profile profile_slurm
OR
snakemake --profile profile_local
Types of snoRNA-RBP Interactions: ADD FIGURE
snoFlake is supported on Linux (tested on Ubuntu).
Please follow the instructions to install the Snakemake workflow management tool. We recommend using Conda/Mamba
to install Snakemake.
This Snakemake workflow has been tested with v7.32.4
.