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Predicting Drug-Gene Relations via Analogy Tasks with Word Embeddings

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Drug-Gene-Analogy

Predicting Drug-Gene Relations via Analogy Tasks with Word Embeddings
Hiroaki Yamagiwa, Ryoma Hashimoto, Kiwamu Arakane, Ken Murakami, Shou Soeda, Momose Oyama, Mariko Okada, Hidetoshi Shimodaira
Preprint

Fig. 2

Code

The source code is being organized and will be available soon.

Reference

  • Chen et al. Bioconceptvec: Creating and evaluating literature-based biomedical concept embeddings on a large scale. PLoS Comput Biol. (2020).

Citation

If you find our code or model useful in your research, please cite our paper:

@misc{yamagiwa2024predicting,
      title={Predicting Drug-Gene Relations via Analogy Tasks with Word Embeddings}, 
      author={Hiroaki Yamagiwa and Ryoma Hashimoto and Kiwamu Arakane and Ken Murakami and Shou Soeda and Momose Oyama and Mariko Okada and Hidetoshi Shimodaira},
      year={2024},
      eprint={2406.00984},
      archivePrefix={arXiv},
      primaryClass={cs.CL}
}