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@sib-swiss

SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 956 182

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 75 34

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 54 22

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 53 14

  5. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 41 10

  6. glittr glittr Public

    A web application for finding and comparing bioinformatics training materials on GitHub and GitLab

    PHP 35 1

Repositories

Showing 10 of 113 repositories
  • containers-snakemake-training Public Forked from sib-swiss/containers-introduction-training

    Course website "Introduction to Containers and Snakemake for Reproducible Research"

    sib-swiss/containers-snakemake-training’s past year of commit activity
    R 4 CC-BY-SA-4.0 13 0 0 Updated Aug 30, 2024
  • containers-introduction-training Public

    Course website "Docker and Singularity for reproducible research: getting started with containers"

    sib-swiss/containers-introduction-training’s past year of commit activity
    HTML 27 CC-BY-4.0 13 1 0 Updated Aug 30, 2024
  • hugo-pathogens-portal Public

    Hugo pathogens portal theme

    sib-swiss/hugo-pathogens-portal’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Aug 30, 2024
  • epinorm Public

    Scripts for processing of disease outbreak records as part of the MOOD project.

    sib-swiss/epinorm’s past year of commit activity
    Python 2 0 1 1 Updated Aug 30, 2024
  • sib-swiss/advanced-r-training’s past year of commit activity
    0 0 0 0 Updated Aug 30, 2024
  • sparql-examples Public

    A set of SPARQL examples that are used in different SIB resources

    sib-swiss/sparql-examples’s past year of commit activity
    HTML 4 3 6 3 Updated Aug 30, 2024
  • sparql-editor Public

    💫 A standard web components to easily deploy a SPARQL query editor for specific SPARQL endpoints using the popular YASGUI editor.

    sib-swiss/sparql-editor’s past year of commit activity
    TypeScript 1 MIT 0 0 0 Updated Aug 30, 2024
  • sparql-examples-utils Public Forked from sib-swiss/sparql-examples

    A tool to maintain and test your SPARQL examples

    sib-swiss/sparql-examples-utils’s past year of commit activity
    Java 0 3 0 0 Updated Aug 29, 2024
  • biodiversity-bioinformatics Public

    Course website "Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions"

    sib-swiss/biodiversity-bioinformatics’s past year of commit activity
    HTML 0 CC-BY-4.0 1 0 0 Updated Aug 29, 2024
  • NGS-variants-training Public

    GitHub for the SIB courses NGS - Genome variant analysis

    sib-swiss/NGS-variants-training’s past year of commit activity
    Shell 26 CC-BY-4.0 9 2 0 Updated Aug 29, 2024