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tbrittoborges/README.md

Thiago Britto-Borges personal repository


Experienced Bioinformatician & Machine Learning Scientist | PhD in Bioinformatics | Specializing in RNA Splicing, Post-Transcriptional Regulation & OMICs Data Analysis.

Overview:

Hello, I'm Thiago Britto Borges! With over 11 years of experience in bioinformatics and computational biology, I specialize in analyzing clinical and OMICs datasets to uncover insights in disease diagnosis and treatment. My expertise spans from developing computational workflows to integrating machine learning techniques for groundbreaking research. I'm passionate about testing (and understanding), benchmarking and then leveraging state-of-the-art methodologies to contribute to multidisciplinary teams in computational biology.

Skills & Interests:

  • Languages: Proficient in Python and R, experienced with Linux systems (bash/fishell).
  • Tools: Snakemake/Nextflow, Docker/Singularity and HPC (sge / slurm).
  • Vast experience mediating the interfae between multi-disciplinary teams.
  • Fields of Interest: Bioinformatics, Computational Biology, Machine Learning, RNA Splicing, Transcriptomics, Proteomics.

Pinned Loading

  1. dieterich-lab/Baltica dieterich-lab/Baltica Public

    Baltica: integrated differential junction usage

    R 8 3

  2. tedx_uod tedx_uod Public

    Code for tedx_uod website.

    CSS

  3. AnnekathrinSilvia/magnetique AnnekathrinSilvia/magnetique Public

    Source code for the magnetique application

    R 2 3

  4. dieterich-lab/nmdtxdb dieterich-lab/nmdtxdb Public

    Shiny application and code for the database for NMD targets

    R 1

  5. dieterich-lab/nmd-wf dieterich-lab/nmd-wf Public

    R

  6. bartongroup/ProteoFAV bartongroup/ProteoFAV Public

    Open-source framework for simple and fast integration of protein structure data with sequence annotations and genetic variation

    Python 3