A serious game to teach plant selective breeding.
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Updated
Sep 13, 2024 - R
A serious game to teach plant selective breeding.
R Shiny app to perform the bioinformatics pipelines developed within Breeding Insight
Computes the Genomic Prediction for the target population across multi environments with only genotypic Data using the options for model selection.
Phasing, haplotype reconstruction and crossover detection with single-nucleotide polymorphism data from multiparental populations.
Sipe H, IN Keren, and SJ Converse. 2023. Integrating community science and agency-collected monitoring data to expand monitoring capacity at large spatial scales. Ecology and Evolution.
This repository is a compilation of all codes for the phenotypic diversity of a worldwide sesame germplasm from the Korean genebank.
This repository serves as a valuable resource for individuals engaged in data exploration, statistical analysis, and research within the domains of plant breeding, genetics, statistics, and genomics. The purpose of this repository is to share a collection of R codes that can be utilized by others for their own data analysis projects
R 📦 providing classes and functions to simulate breeding schemes.
Forward simulation of breeding strategies
This repository contains the files from my master thesis project required to conduct a whole-genome analysis of haploblocks in wheat based on pairwise comparisons between assemblies. This is based on a previous method (https://doi.org/10.1038/s42003-020-01413-2), but focuses on the the quality of the pairwise comparisons to call haplotypes.
An R Shiny web app for improving the efficiency of making paired crosses in plant breeding.
project runned during the JRL about farmer seeds
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