BWA-MEME: Faster BWA-MEM2 using learned-index
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Updated
Jul 1, 2024 - C++
BWA-MEME: Faster BWA-MEM2 using learned-index
vSNP -- validate SNPs
Library-free horizontal transfer detection, with a focus on transposable element invasions
Multi-class classification of drug resistance in MTB clinical isolates
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
Nextflow resequencing pipeline with bwa-mem and freebayes
Multi-class classification of drug resistance in MTB clinical isolates
Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline
The DKFZ alignment workflow plugin originally developed at the eilslabs
R wrapper for BWA-backtrack and BWA-MEM aligners
This repository will house the scripts used to analyze and represent genomic and temperature data for my dissertation.
Optimised pipeline to process whole genome sequence data from fastq to BAM on NCI Gadi
Small GATK alignment and variant calling pipeline using python
Focused on constructing a phylogenetic tree from Philippine strains of Candida albicans.
Fast bwa-mem dna matching algor implemented in system verilog, fully synthesizable.
Collecting Genotypes from ENA and make their SNPs
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