Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.
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Updated
Jan 27, 2024 - Python
Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.
Code to reproduce Adaptive elastic-net sparse PCA for robust cross-species, cross-platform analysis of complex gene expression data in Alzheimer’s disease (Hin et al.)
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Cross-species integration of single cell RNA-seq data from the primary motor cortex between human, mouse and drosophila using expiMap and SATURN
Scan genomes for internally repeated sequences, elements which are repetitive in another species, or high-identity HGT candidate regions between species.
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Workflow to identify functional cis-regulatory regions for each annotated cell type
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