Z-stack Depth Colorcode ImageJ FIJI plugin
-
Updated
Feb 17, 2021 - Java
Z-stack Depth Colorcode ImageJ FIJI plugin
This is a plugin for ImageJ2 for multifractal analysis of 2D and 3D images. Cite: MULTIFRAC: An ImageJ plugin for multiscale characterization of 2D and 3D stack images . IG Torre, R. J. Heck and AM Tarquis. SoftwareX, 12, 100574.
An ImageJ plugin to quantify ciliary shape, length, and fluorescence.
An ImageJ plugin to analyze the flagellar beat of sperm, motile cilia beat, and sperm steering.
spatial and temporal cross correlations in 1D and 2D for fluorescent microscopy (ImageJ plugin)
Fiji/ImageJ plugin to annotate a labeled image
ImageJ plugin to quickly load multiphoton imaging data from PrairieView folders
Mageek is an ImageJ Java plugin to batch process microscope images
ImageJ plugin that converts regions from label maps into polygons
An ImageJ plugin to prepare images for analysis using CiliaQ.
An ImageJ plugin to analyze pixel intensity oscillations in time-lapse 2D images. For example, this allows to characterize the ciliary beat of multi-ciliated cells in time-lapse images acquired with a bright-field or phase-contrast microscope.
ExtractSharpestPlane_JNH is an ImageJ/FIJI plugin to automatically extract the sharpest plane by highest SD from image stacks for large data sets.
Morphological dilation and erosion using sliding structuring elements
GridRuler is ImageJ plugin for counting objects in slide with grid
Add a description, image, and links to the imagej-plugin topic page so that developers can more easily learn about it.
To associate your repository with the imagej-plugin topic, visit your repo's landing page and select "manage topics."