Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)
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Updated
Apr 3, 2024 - Python
Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)
a tool for predicting mitochondrial DNA deletions using soft-clipping
Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari
LOCALIZER: subcellular localization prediction of plant and effector proteins in the plant cell
mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data
Mitochondrial Alteration Enrichment and Genome Analysis Toolkit
This repository contains all the code used for the publication "Morphological principles of neuronal mitochondria".
MitoMut is a tool to call mitochondrial deletions from next generation sequencing (NGS) data
A snakemake pipeline wrapping MitoZ and getOrganelle for de novo mitogenome assembly using short reads and subsequent QC.
Do you like how energy is made in our cells? Well, this program has the goal to simulate aerobic respiration, latic fermentation and alcoholic fermentation!
Taxonomic classification and read binning of mitochondrial DNA
Complements mitoSim - the simulator of cell mitochondria as a spacelss graph.
Python package to plot variants on the human mitochondrial genome.
MToolBox pipeline written in snakemake to allow a better scalability
Module and script to remove contamination in assembled genomes before submission to ncbi
Toolbox for Identifying Mitochondria Instance Segmentation Errors
Infer the dynamics of mitochondrial heteroplasmy during different life stages using population genetics and phylogenetics
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