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Sep 22, 2018 - Python
motif-finding
Here are 19 public repositories matching this topic...
Coding problems from course 1 of the Bioinformatics specialization
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Feb 14, 2019 - Python
Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.
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Mar 18, 2019 - Shell
Finding motifs in proteins by uniprot accession number
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Feb 20, 2020 - Python
Finding Network Motifs Using MCMC Sampling
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Aug 4, 2020 - C++
Example implementation of "Mueen's Algorithm for Similarity Search" (aka MASS) for ESP32
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Aug 18, 2020 - C
Perl script to find sequences on multi fasta files that match a determined protein motif. The motifs are coded as a regular expression RegEx. Originally designed to search for fungal chitin synthase proteins.
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Mar 17, 2021 - Perl
R script for finding and scoring motifs in small genomes using position-frequency tables
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Feb 14, 2022 - R
This is a scanner designed to recognise DNA motifs within a long stretch of DNA. It uses two models for discrimination, one model representing the target and the second model representing the background.
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Mar 21, 2022 - HTML
Scans TF binding sites based on motifs.
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Apr 12, 2022 - Python
Motif Finding through Gibbs Sampling
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Jul 28, 2022 - Python
Motif Finding using Gibbs Sampler
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Aug 1, 2022 - Python
Bioinformatics- High-throughput data Analysis project
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Aug 1, 2022 - R
Deep Unfolded Convolutional Dictionary Learning for motif discovery.
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Feb 2, 2023 - Julia
This application searches inside a text sequence for words that resemble those inside a list of similar words.
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Feb 9, 2023 - Visual Basic 6.0
Intro to Bioinformatics course contents
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Feb 14, 2024 - Python
Automatic Motif Detection wrapper for dotmotif
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Apr 30, 2024 - Python
Gibby is a Python package designed to find the motif of a transcription factor de novo based on ChIP-seq data.
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Jun 6, 2024 - Python
A React component to sketch / search for network motifs.
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Aug 1, 2024 - JavaScript
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